Hi Chris, unfortunately none of us here have played around with the API yet. I would recommend inquiring on the galaxy-central's mailing list ( mailto:galaxy-dev@lists.bx.psu.edu <galaxy-dev@lists.bx.psu.edu>).
- workflows, histories, libraries, and datasets have IDs in the database but they may be obscured in the URLs used in galaxy; in the db they're just integer primary keys - histories must exist to do any work, but you can create a new history On Thu, Dec 1, 2011 at 4:32 PM, Craig Blackhart <blackh...@lanl.gov> wrote: > I am newish to Galaxy and trying to learn how I might integrate it with > our workflows and LIMS for automated data handling. I am aware of the API > and have looked up all the documentation that I could find. However, there > are many things I cannot make sense of, and have not been able to find > information to help me out. I think a good place to start asking questions > is with how to run workflow_execute.py and ask what each of the parameters > are and where to get the information from them**** > > ** ** > > Arguments**** > > *API key – got this and understand**** > > *url – got this and understand**** > > *workflow_id – I have created workflows and have been able > to find what looks to be a workflow_id by clicking on the workflow name and > selecting “Download or Export”. It seems this may be correct, is it?**** > > *history – a named history to use? Should this already > exist? I have no idea here.**** > > *step=src=dataset_id - ??? I have no idea ??? I have seen > how to create data libraries manually at the command line; does this factor > in?**** > > ** ** > > If anyone has information they can help me out with, it would be much > appreciated.**** > > ** ** > > Thanks**** > > ** ** > > Craig Blackhart**** > > Computer Scientist**** > > Applied Engineering Technologies**** > > Los Alamos National Laboratory**** > > 505-665-6588**** > > *This message contains no information that requires ADC review* > > ** ** > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > > http://lists.bx.psu.edu/ >
___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
