I am newish to Galaxy and trying to learn how I might integrate it with our
workflows and LIMS for automated data handling. I am aware of the API and
have looked up all the documentation that I could find. However, there are
many things I cannot make sense of, and have not been able to find
information to help me out. I think a good place to start asking questions
is with how to run workflow_execute.py and ask what each of the parameters
are and where to get the information from them
Arguments
*API key - got this and understand
*url - got this and understand
*workflow_id - I have created workflows and have been able to
find what looks to be a workflow_id by clicking on the workflow name and
selecting "Download or Export". It seems this may be correct, is it?
*history - a named history to use? Should this already
exist? I have no idea here.
*step=src=dataset_id - ??? I have no idea ??? I have seen
how to create data libraries manually at the command line; does this factor
in?
If anyone has information they can help me out with, it would be much
appreciated.
Thanks
Craig Blackhart
Computer Scientist
Applied Engineering Technologies
Los Alamos National Laboratory
505-665-6588
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