Hi
We have set up galaxy in a production environment and our galaxy users
can connect to the FTP and upload files. No worries.
The settings in the universe file seem correct and are.
ftp_upload_dir = /home/galaxy/galaxy-dist/database/ftp
It creates the directory and uploads the file. But when the user signs
into galaxy they cannot view their file in the get data -> from files
on my computer.
Proftp config is listed below.
Cheers James Boocock
ServerName "Public Galaxy FTP"
ServerType standalone
DefaultServer on
Port 21
Umask 077
SyslogFacility DAEMON
SyslogLevel debug
MaxInstances 30
User nobody
Group nogroup
DisplayConnect /etc/opt/local/proftpd_welcome.txt
# Passive port range for the firewall
PassivePorts 30000 40000
# Cause every FTP user to be "jailed" (chrooted) into their home directory
DefaultRoot ~
# Automatically create home directory if it doesn't exist
CreateHome on dirmode 1700
# Allow users to overwrite their files
AllowOverwrite on
# Allow users to resume interrupted uploads
AllowStoreRestart on
# Bar use of SITE CHMOD
<Limit SITE_CHMOD>
DenyAll
</Limit>
# Bar use of RETR (download) since this is not a public file drop
<Limit RETR>
DenyAll
# Do not authenticate against real (system) users
AuthPAM off
# Set up mod_sql_password - Galaxy passwords are stored as hex-encoded SHA1
SQLPasswordEngine on
SQLPasswordEncoding hex
# Set up mod_sql to authenticate against the Galaxy database
SQLEngine on
SQLBackend postgres
SQLConnectInfo galaxydb galaxyftp 1234
SQLAuthTypes SHA1
SQLAuthenticate users
# An empty directory in case chroot fails
SQLDefaultHomedir /var/opt/local/proftpd
# Define a custom query for lookup that returns a passwd-like entry.
UID and GID should match your Galaxy user.
# Do not authenticate against real (system) users
AuthPAM off
# Set up mod_sql_password - Galaxy passwords are stored as hex-encoded SHA1
SQLPasswordEngine on
SQLPasswordEncoding hex
# Set up mod_sql to authenticate against the Galaxy database
SQLEngine on
SQLBackend postgres
SQLConnectInfo galaxydb galaxyftp 1234
SQLAuthTypes SHA1
SQLAuthenticate users
# An empty directory in case chroot fails
SQLDefaultHomedir /var/opt/local/proftpd
# Define a custom query for lookup that returns a passwd-like entry.
UID and GID should match your Galaxy user.
SQLUserInfo custom:/LookupGalaxyUser
SQLNamedQuery LookupGalaxyUser SELECT
"email,password,'512','512','/home/galaxy/galaxy-dist/database/ftp/%U','/bin/bash'
FROM galaxy_user WHERE email='%U'"
SQLUserInfo custom:/LookupGalaxyUser
SQLNamedQuery LookupGalaxyUser SELECT
"email,password,'512','512','/home/galaxy/galaxy-dist/database/ftp/%U','/bin/bash'
FROM galaxy_user WHERE email='%U'"
</Limit>
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