Hello, I'm very new to Galaxy development. What we've got is a tool we've created that will use our own API/web services in order to use BAM files in our database as the data source in Galaxy.
I got it to work on a very tiny BAM file, but now that that is working, I tried it on a larger one and am seeing the following error: An error occurred running this job: Unable to fetch https://[address to method calling web service]: 'ascii' codec can't decode byte 0xc2 in position 25686: ordinal not in range(128) As far as I can tell from Google, it appears this error has to do with python expecting ascii, but I'm calling Galaxy with the following code: String MimeType = "application/octet-stream"; BufferedOutputStream out = new BufferedOutputStream(response.getOutputStream()); byte[] result = [call to my web service]; response.setContentType(MimeType); response.setHeader("Content-Disposition","attachment;filename=GalaxyResponse"); out.write(result, 0, result.length); Is there anything wrong with this? Or is there some other code I might need to modify, such as in data_source.py? Any help is appreciated, thanks! Brian Luerman Intrepid Bioinformatics (502) 212-2699 http://intrepidbio.com/
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