Good evening,
I am having difficulty getting galaxy to startup over the last couple of days,
I initially suspected that it was an issue with the eggs, but have replaced
these and the following errors remain,
galaxy@jic55119: $ python --version
Python 2.6.6
galaxy@jic55119:galaxy-central$ ./run.sh
Traceback (most recent call last):
File "./scripts/paster.py", line 34, in <module>
command.run()
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteScript-1.7.3-py2.6.egg/paste/script/command.py",
line 84, in run
invoke(command, command_name, options, args[1:])
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteScript-1.7.3-py2.6.egg/paste/script/command.py",
line 123, in invoke
exit_code = runner.run(args)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteScript-1.7.3-py2.6.egg/paste/script/command.py",
line 218, in run
result = self.command()
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteScript-1.7.3-py2.6.egg/paste/script/serve.py",
line 276, in command
relative_to=base, global_conf=vars)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteScript-1.7.3-py2.6.egg/paste/script/serve.py",
line 313, in loadapp
**kw)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteDeploy-1.3.3-py2.6.egg/paste/deploy/loadwsgi.py",
line 204, in loadapp
return loadobj(APP, uri, name=name, **kw)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteDeploy-1.3.3-py2.6.egg/paste/deploy/loadwsgi.py",
line 224, in loadobj
global_conf=global_conf)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteDeploy-1.3.3-py2.6.egg/paste/deploy/loadwsgi.py",
line 248, in loadcontext
global_conf=global_conf)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteDeploy-1.3.3-py2.6.egg/paste/deploy/loadwsgi.py",
line 278, in _loadconfig
return loader.get_context(object_type, name, global_conf)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteDeploy-1.3.3-py2.6.egg/paste/deploy/loadwsgi.py",
line 413, in get_context
section)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteDeploy-1.3.3-py2.6.egg/paste/deploy/loadwsgi.py",
line 458, in _context_from_explicit
value = import_string(found_expr)
File
"/home/home/galaxy/software/galaxy-central/eggs/PasteDeploy-1.3.3-py2.6.egg/paste/deploy/loadwsgi.py",
line 18, in import_string
return pkg_resources.EntryPoint.parse("x="+s).load(False)
File "/home/home/galaxy/software/galaxy-central/lib/pkg_resources.py", line
1954, in load
entry = __import__(self.module_name, globals(),globals(), ['__name__'])
File "/home/home/galaxy/software/galaxy-central/lib/galaxy/web/buildapp.py",
line 19, in <module>
from galaxy import config, jobs, util, tools
File "/home/home/galaxy/software/galaxy-central/lib/galaxy/jobs/__init__.py",
line 4, in <module>
from galaxy import util, model
EOFError: EOF read where object expected
Any suggestions?
Thanks in advance
Michael.
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