This issue has been corrected in change set revision 6817:b199460443af, which
is available in our central repository. The problem was due to the following
tool contained in the repository not properly loading in the tool shed due to
the required file named tool_data_table_conf.xml.sample missing from the
repository. When you install the repository into your local Galaxy instance,
you'll need to add an entry for this tool into your tool_data_table_conf.xml
file and the tool should load. I'm not sure what the entry should look like
since the sample file is missing from the repository. The fix I've committed
handles the problem caused by the missing entry in the tool shed.
Thanks very much for reporting this.
Greg Von Kuster
Metadata was defined for some items in revision '9266d807ca85'. Correct the
following problems if necessary and reset metadata.
DNAPropertyCalculator.xml - This file requires an entry in the
tool_data_table_conf.xml file. Upload a file named
tool_data_table_conf.xml.sample to the repository that includes the required
entry to resolve this issue.
On Mar 9, 2012, at 2:08 PM, Anthonius deBoer wrote:
> I'm getting this error when I try to install the NGS Java toolkit toolshed...
> Version information for the tools included in the java_genomics_toolkit
> repository is missing. Reset all of this repository's metadata in the tool
> shed, then set the installed tool versions from the installed repository's
> Repository Actions menu. Installed 1 repository and all tools were loaded
> into tool panel section NGS: Toolkit:
> Installed repositories: java_genomics_toolkit.
> Any idea why the version number stuff is not correctly inserted in the
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Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at: