On Tue, May 1, 2012 at 3:03 PM, Dannon Baker <dannonba...@me.com> wrote: > On May 1, 2012, at 9:51 AM, Peter Cock wrote: > >> I'm a little confused about tasks.py vs drmaa.py but that TODO >> comment looks pertinent. Is that the problem here? > > The runner in tasks.py is what executes the primary job, splitting > and creating the tasks. The tasks themselves are actually injected > back into the regular job queue and run as normal jobs with the > usual runners (in your case drmaa). > > And, yes, it should be fairly straightforward to add, but this just > hasn't been implemented yet.
So the stop_job method for the runner in task.py needs to call the stop_job method of each of the child tasks it created for that job (which in this case are drmaa jobs - but could be pbs etc jobs). I'm not really clear how all that works. Should I open an issue on this? Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/