I'm working with a data set with 8 samples and have run them through bow tie
(previously) and am trying to run them in cufflinks now. The odd numbered
samples I have run fine and produce data but the even numbered samples I have
all produce no data in terms of an FPKM or any other calculation. I'm looking
at gene expression and my test samples are in fact the even numbered ones that
are not providing me with calculations. Is there a simple reason for this?
Apologies if this is a simple question but I have tried to adjust the settings
a few time to no avail. Any and all help would be greatly appreciated. Thanks!
PSM in Bioinformatics
College of Computing and Informatics
University of North Carolina at Charlotte
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