Hello Ted,
Workflows are included in the Galaxy Main Tool Shed
http://toolshed.g2.bx.psu.edu/
--> Search for workflows
Documentation is in this wiki (see #22, 23, & 24):
http://wiki.g2.bx.psu.edu/Tool%20Shed
Other current information about workflow development can be found in the
meeting notes from the 2012 GCC Breakout.
http://wiki.g2.bx.psu.edu/Events/GCC2012/Program/Breakouts/WorkflowsAndAPI
Best,
Jen
Galaxy team
On 8/10/12 1:31 PM, Ted Goldstein wrote:
Hi Jen,
I know we are using Mercurial for Galaxy's own source code.
Is there a way for Galaxy to store and retrieve workflows from Mercurial?
Thanks,
Ted
UCSC CBSE
On Aug 10, 2012, at 1:06 PM, Jennifer Jackson wrote:
Hi Diana,
Galaxy itself will run on any recent MAC with the basic requirements (python,
mercurial, etc.). The standard set-up isn't computationally intensive at all.
What makes a difference are the tools you intend to use, the size of the data
(genomes, datasets, libraries), the volume of throughput, and processing speed
expectations.
This wiki has some general guidelines that can help you decide between how to
use Galaxy (Main, Local, or Cloud) based on these and related factors:
http://wiki.g2.bx.psu.edu/Big%20Picture/Choices
But what would be best, to address your specific question, is if you could
provide more information about what you intend to do. Others on the mailing
list would likely be able to comment about what type of set-up they are using
successfully for similar work.
Best,
Jen
Galaxy team
On 8/10/12 8:53 AM, Diana Cox-Foster wrote:
I was wondering if anyone could comment on how memory/computational intensive a
local instal of Galaxy is? What type of computer (especially Macs) is needed
for a local install to run fairly well?
Thanks for any info--- Diana
**********************************
Diana Cox-Foster, Professor
office: 536 ASI Bldg
MAIL:
501 ASI Bldg
Department of Entomology
Penn State University
University Park, PA, USA 16802
email: dx...@psu.edu
office phone: 814-865-1022
dept. phone: 814-865-1895
--
Jennifer Jackson
http://galaxyproject.org
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--
Jennifer Jackson
http://galaxyproject.org
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