Hi, the gfap tool from the main toolshed has a annovar wrapper included. Maybe that is something for you.
Ciao, Bjoern > Hi all, > > > > I have a new project that requires setting up a local Galaxy instance > for a client including integrating new tools and some reference data > sources. > > I’m new to the Galaxy community so am also learning along the way. > > > > There’s been a request to integrate the ANNOVAR tool for their system. > > I’ve searched the mailing-list archive and found this question was > posed earlier in the year but there was no reply. > > I couldn’t find any tool wrappers for it on Toolshed, but considering > it is such a widely-used tool, I’m wondering whether anyone has any > knowledge if this tool has been wrapped for Galaxy before? > > > > Many thanks, > > Xin-Yi > > _____________________________________ > Xin-Yi Chua > Senior Bioinformatician > > Queensland Facility for Advanced Bioinformatics > Level 6, QBP > University of Queensland, Q4072 > > T: +61 (0)7 3346 2125 > > M: +61 (0) 439 783 953 > E: xinyi.c...@qfab.org > > www.qfab.org > > > > > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > > http://lists.bx.psu.edu/ -- Björn Grüning Albert-Ludwigs-Universität Freiburg Institute of Pharmaceutical Sciences Pharmaceutical Bioinformatics Hermann-Herder-Strasse 9 D-79104 Freiburg i. Br. Tel.: +49 761 203-4872 Fax.: +49 761 203-97769 E-Mail: bjoern.gruen...@pharmazie.uni-freiburg.de Web: http://www.pharmaceutical-bioinformatics.org/ ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/