Hi Alexander, There is a -t for PeakRanger to indicate the number of threads. I don't think macs14 or macs2 can run on mutltiple cores - I am cc'ing Tao Lui, the author of macs, who can confirm this.
Thanks, Q On Tue, Mar 26, 2013 at 6:15 AM, Alexander Kurze <alexander.ku...@gmail.com> wrote: > Hi there, > > we have a 32 core server but I realised that a lot of programs are only > using a fraction of that. I was able to adjust bowtie, bowtie2 and Tophat to > use all of the cores but couldn't find an thread/core option for Macs14, > Macs2 or PeakRanger. Does anyone know if these programs are capable of multi > threading? > If yes, where do I adjust it? Would be nice to have some global parameter > set in the universewgsi.ini file. > > Thanks, > > Alex > > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this > and other Galaxy lists, please use the interface at: > http://lists.bx.psu.edu/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
