On Mar 21, 2013, at 10:19 AM, <brozp...@email.cz> <brozp...@email.cz> wrote:

> Hello,
> 
> please could you help me, how to run galaxy directly from my computer? I am 
> using Bio-Linux (ubuntu distribution) and there is GALAXY already install. 
> When I try to open it, it is state that: 
> 
> "The Galaxy server doesn't seem to be running on your machine. You may need 
> to start it with the command: sudo start galaxy Or else Galaxy may still be 
> starting up (it takes a couple of minutes to get going on the first run)."
> 
> When I open terminal and write sudo start galaxy it is state that galaxy 
> start/running... But when I trying to open galaxy (just double clic on the 
> icon) it still state problem which I write above. 

Hi Petr,

It looks like Upstart believes that Galaxy is running, but Galaxy is not 
actually listening on the port like it should be.  I'd have a look in the 
Galaxy log file to see whether it's had a problem:

/var/log/galaxy/galaxy.log

You can also use `sudo restart galaxy` to try restarting the process.

--nate

> 
> Could you help me please how to fix it?? 
> 
> Thank you very much for your reply!
> 
> Have a nice day,
> 
> Petr.
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