Hi Nate, thank you for the help, I'm posting more details about the error, Did 
you ever see something like this?

Thank you so much,

WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'ps': 
'module' object has no attribute 'scripts'
WARNING:galaxy.datatypes.registry:Error appending sniffer for datatype 
'galaxy.datatypes.scripts:PostScript' to sniff_order: No module named scripts
INFO:NetCDFwithTimeAxis:NetCDFwithTimeAxis set_meta
INFO:NetCDFwithTimeAxis:NetCDF set_meta
INFO:NetCDFwithTimeAxis:Climate set_meta
[localhost] local: . 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;cdo
 infon /home/ramao/galaxy/database/files/000/dataset_15.dat

Fatal error: local() encountered an error (return code 127) while executing '. 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;cdo
 infon /home/ramao/galaxy/database/files/000/dataset_15.dat'

Aborting.
[localhost] local: . 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;cdo
 sinfo /home/ramao/galaxy/database/files/000/dataset_15.dat

Fatal error: local() encountered an error (return code 127) while executing '. 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;cdo
 sinfo /home/ramao/galaxy/database/files/000/dataset_15.dat'

Aborting.
[localhost] local: . 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;ncdump
 -x /home/ramao/galaxy/database/files/000/dataset_15.dat

Fatal error: local() encountered an error (return code 127) while executing '. 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;ncdump
 -x /home/ramao/galaxy/database/files/000/dataset_15.dat'

Aborting.
galaxy.jobs.runners.local DEBUG 2013-04-17 09:51:59,955 execution of external 
set_meta for job 15 finished
galaxy.jobs DEBUG 2013-04-17 09:51:59,979 Tool did not define exit code or 
stdio handling; checking stderr for success
galaxy.datatypes.metadata DEBUG 2013-04-17 09:52:00,029 setting metadata 
externally failed for HistoryDatasetAssociation 15: External set_meta() not 
called
NetCDFwithTimeAxis INFO 2013-04-17 09:52:00,029 NetCDFwithTimeAxis set_meta
NetCDFwithTimeAxis INFO 2013-04-17 09:52:00,029 NetCDF set_meta
NetCDFwithTimeAxis INFO 2013-04-17 09:52:00,029 Climate set_meta
[localhost] local: . 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;cdo
 infon /home/ramao/galaxy/database/files/000/dataset_15.dat

Fatal error: local() encountered an error (return code 127) while executing '. 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;cdo
 infon /home/ramao/galaxy/database/files/000/dataset_15.dat'

Aborting.
[localhost] local: . 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;cdo
 sinfo /home/ramao/galaxy/database/files/000/dataset_15.dat

Fatal error: local() encountered an error (return code 127) while executing '. 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;cdo
 sinfo /home/ramao/galaxy/database/files/000/dataset_15.dat'

Aborting.
[localhost] local: . 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;ncdump
 -x /home/ramao/galaxy/database/files/000/dataset_15.dat

Fatal error: local() encountered an error (return code 127) while executing '. 
/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/env.sh;ncdump
 -x /home/ramao/galaxy/database/files/000/dataset_15.dat'


> Subject: Re: [galaxy-dev] Unable to finish job
> From: n...@bx.psu.edu
> Date: Tue, 16 Apr 2013 11:45:37 -0400
> CC: galaxy-dev@lists.bx.psu.edu
> To: ramao_tiago_tibur...@hotmail.com
> 
> On Apr 16, 2013, at 9:37 AM, Ramon Tiburski wrote:
> 
> > I,m getting this error when I try to convert some data, can someone help me?
> > 
> > Traceback (most recent call last):
> >   File "/home/ramao/galaxy/lib/galaxy/jobs/runners/local.py", line 156, in 
> > run_job
> >     job_wrapper.finish( stdout, stderr, exit_code )
> >   File "/home/ramao/galaxy/lib/galaxy/jobs/__init__.py", line 412, in finish
> >     dataset.datatype.set_meta( dataset, overwrite = False ) #call 
> > datatype.set_meta directly for the initial set_meta call during dataset 
> > creation
> >   File 
> > "/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/earthsystem.py",
> >  line 318, in set_meta
> >     NetCDF.set_meta(self,dataset)
> >   File 
> > "/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/earthsystem.py",
> >  line 261, in set_meta
> >     ncml= execAndGetStdout("ncdump -x "+dataset.file_name)
> >   File 
> > "/home/ramao/shed_tools/web.uniparthenope.it/repos/montella/galaxy_es_core/a8f8a904173c/galaxy_es_core/earthsystem.py",
> >  line 48, in execAndGetStdout
> >     output=local(cmd, capture=True)
> >   File 
> > "/home/ramao/galaxy/eggs/Fabric-1.4.2-py2.7.egg/fabric/operations.py", line 
> > 1012, in local
> >     error(message=msg, stdout=out, stderr=err)
> >   File "/home/ramao/galaxy/eggs/Fabric-1.4.2-py2.7.egg/fabric/utils.py", 
> > line 305, in error
> >     return func(message)
> >   File "/home/ramao/galaxy/eggs/Fabric-1.4.2-py2.7.egg/fabric/utils.py", 
> > line 26, in abort
> >     sys.exit(1)
> > SystemExit: 1
> 
> Hi Ramon,
> 
> For a definite answer, you'll want to contact the tool/datatype author.  
> However, I would guess that the `ncdump` command is failing for some reason, 
> and that would be the place to look.
> 
> --nate
> 
> > 
> > ___________________________________________________________
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