Hello,
I try to set "Get Microbial Data" in my local instance of Galaxy.
So, as explain in
/path/to//src/galaxy/galaxy-dist/scripts/microbes/README.txt , step 1
and 2 or OK, binary 'faToNib' is available on our cluster, but step 3
generate empty files :
drwxr-xr-x 4 galaxy wbioinfo 100 18 avril 14:26 ..
-rw-r--r-- 1 galaxy wbioinfo 203 18 avril 14:26 harvest.txt
-rw-r--r-- 1 galaxy wbioinfo 69 18 avril 14:34 ncbi_to_ucsc.txt
-rw-r--r-- 1 galaxy wbioinfo 0 19 avril 15:47 sequence.txt
-rw-r--r-- 1 galaxy wbioinfo 0 19 avril 15:47 seq.loc
drwxr-xr-x 2 galaxy wbioinfo 118 19 avril 15:47 .
Could you please, hel me ?
Thnaks in advance,
Sarah Maman
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Sarah Maman
INRA - LGC - SIGENAE
http://www.sigenae.org/
Chemin de Borde-Rouge - Auzeville - BP 52627
31326 Castanet-Tolosan cedex - FRANCE
Tel: +33(0)5.61.28.57.08
Fax: +33(0)5.61.28.57.53
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