Hi Andreas,

try something like the following:

<destination id="20cores_10G" runner="drmaa">
   <param id="nativeSpecification">-l h_vmem=10G -pe "*" 20</param>
</destination>

Hope that helps,
Björn

> Hi,
> 
> I recently updated our local galaxy instance first time after a few month. 
> Afterwards I noticed that 
> the way to setup job runners has changed from single lines to an extra 
> XML-file.
> I now started to write a job_conf.xml but I don't understand where I put the 
> parameters for GridEngine.
> 
> I already read http://wiki.galaxyproject.org/Admin/Config/Jobs but seem to 
> have missed this info.
> For example in the old style I have lines like
> 
> velveth = drmaa://-l h_vmem=25G/
> 
> 
> In the new style I would write
> 
> "
> ...
> <destinations>
>         <destination id="cluster" runner="drmaa"/>
> </destinations>
> <tools>
>          <tool id="velveth" destination="cluster"/>
> 
> </tools>
> ...
> "
> 
> But where do I put the "-l h_vmem"?
> 
> regards, Andreas
> 



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