It keeps doing posts, and I'm not seeing any new errors. 

200 OK

When I did a browser refresh, I got the following javascript error:     (I am 
logged in)

Galaxy.currUser is undefined on Line 631 in history-panel.js

When I opened the data library where the bam file was copying, everything is 
rendered ok.  It seems the browser refresh fixed things.


On Nov 4, 2013, at 11:14 AM, James Taylor <> wrote:

> Robert, I'm not sure what is going on here, other than that the javascript 
> that converts buttons into dropdown menus has not fired. 
> Are there any javascript errors? 
> Marten is working on rewriting libraries, and we will be eliminating the 
> progressive loading popupmenus for something much more efficient, but this 
> also might indicate a bug so let us know if there is anything odd in the 
> console. 
> --
> James Taylor, Associate Professor, Biology/CS, Emory University
> On Mon, Nov 4, 2013 at 1:58 PM, Robert Baertsch <> wrote:
> HI James,
> I just pulled in the latest code to see how you changed from iframe to divs. 
> Very exciting update.
> I tried importing a bam file into the library using the admin tool that reads 
> the file directly from a path on the server.
> During the copy operation, the screen gets into a weird state. 
> ps -ef shows these two processes running:
>  python /data/galaxy-central/tools/data_source/ /data/galaxy-central 
> /data/galaxy-central/database/tmp/tmpywxnFE 
> /data/galaxy-central/database/tmp/tmpXkEvSY 
> 8876:/data/galaxy-central/database/job_working_directory/004/4547/dataset_8876_files:/data/galaxy-central/database/files/008/dataset_8876.dat
>  samtools sort /data/galaxy-central/database/files/008/dataset_8876.dat 
> /tmp/tmpNbcggh/sorted
> Do you finish rendering the screen after the copy operation is complete?
> -Robert
> <Screen Shot 2013-11-04 at 10.53.02 AM.png>

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