> Without details about your incoming data rate and size, it's very difficult > to answer this question. I suggest taking some of your data, running it on > our public server (usegalaxy.org), and seeing how long it takes. RNA-seq > tools (Tophat, Cufflinks, etc.) use 4 cores for a job, so you can estimate > how many cores you might need (as well as estimate disk space).
I was mistaken: RNA-seq tools use 8 cores on our public server. Best, J.
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