Dear Galaxy community,

I'm facing a problem in installing a tool from the tool-shed repository for a 
while now and I still don't know how to make it.

I'm trying to install deepTools (https://github.com/fidelram/deepTools) into 
our Galaxy instance but I never got the tools neither properly installed nor 
working.

To make a long story short :
I installed deepTools from the admin panel but got an error due to one of the 
dependencies (Scipy).
I solved the dependency problem, uninstalled the tool and try to reinstall it.
When I tried to reinstall the tool, nothing happened in the panel "monitor 
installing tool shed repositories".

And when I look at what's is prompted from Galaxy logs. The same message is 
prompted again and again until I leave the "monitor installing tool shed 
repositories" page (see attached file).

I also tried to reinstall the tool from the API but I've been told that I 
cannot since the tool has already been previously installed.

Is there a way to completely remove a tool from Galaxy to restart the tool 
installation from the beginning?

Thank you in advance for your help,

Stephanie
--
Stephanie Le Gras
INSERM
Computational scientist - Bioinformatician
Microarray and high throughput sequencing platform
IGBMC
1, rue Laurent Fries
67404 ILLKIRCH Cedex
France
Tel. : +33 (0)3 88 65 32 73

192.168.13.2 - - [29/Nov/2013:11:15:45 +0200] "POST 
/admin_toolshed/repository_installation_status_updates HTTP/1.0" 200 - 
"http://test.galaxy-igbmc.fr/admin_toolshed/manage_repositories?status=done&includes_tools_for_display_in_tool_panel=True&new_tool_panel_section=&tool_panel_section=ngs%3A_deeptools&shed_tool_conf=.%2Fshed_tool_conf.xml&install_repository_dependencies=true&install_repository_dependencies=true&encoded_repo_info_dicts=97e5535df3d294e05bf6da9336f6b5c087cb799b%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 "Mozilla/5.0 (Macintosh; Intel Mac OS X 10.7; rv:25.0) Gecko/20100101 
Firefox/25.0"
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