On Wednesday, February 19, 2014, Peter Cock <p.j.a.c...@googlemail.com>

> On Wed, Feb 19, 2014 at 2:16 PM, John Chilton 
> <jmchil...@bx.psu.edu<javascript:;>>
> wrote:
> > Hey Peter,
> >
> > Have you seen this solution?
> >
> >
> https://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Number_of_Output_datasets_cannot_be_determined_until_tool_run
> >
> > It always seems to get mentioned when this topic is brought up. It has
> > serious limitations in terms or workflow running, but it can probably
> > be made to work for individual tool executions.
> Hmm. Any real life examples of this in use? I guess looking for
> the magic string $__new_file_path__ in the <command> tag
> is the only way to identify this?
Hi Peter,

I used the current functionality here:

The code for the underlining tool is available here:

Hope it helps,
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