Is the expected behavior that environmental variables setup in a tool’s
tool_dependencies.xml file are not available in the tool’s python virtualenv
during runtime? It’s seems odd that we can specify modules (installable from
pip) that are available during runtime, but that the environmental variables
are not available during runtime.
Michael E. Cotterell
Ph.D. Student in Computer Science, University of Georgia
Instructor of Record, Graduate RA & TA, University of Georgia
Department Liaison, CS Graduate Student Association, University of Georgia
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: