Hello galaxy community,
I have a question regarding testing tools. I just setup a galaxy server to 
submit jobs to a cluster. Everything seems to be in order so far. Are there 
established workflows with test data that allow you to test a typical analysis 
(ex. RNA-Seq - from raw reads to counts, ChIP-Seq-from raw reads to enriched 
regions, SNP analysis-from raw reads to a VCF file etc). I want to be able run 
my tools on small test sets to make sure everything is fine and dandy, before I 
open it up to some beta testers.

As an aside does galaxy have any dataset size limitations? Does it work equally 
well with an 8GB fastq/bam file compared to a 50-100GB fastq/bam?

Please keep all replies on the list by using "reply all"
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

To search Galaxy mailing lists use the unified search at:

Reply via email to