Hi Huayan,

these tools should mostly be available from the Tool Shed (Galaxy's
appstore). You can install them easily into any Galaxy that you are an
admin of. Please see more information here:
https://wiki.galaxyproject.org/Admin/Tools

Martin,
galaxy team


On Thu, Mar 20, 2014 at 1:57 AM, Huayan Gao <huayan...@gmail.com> wrote:

> Hi Martin,
>
> Actually I want a "NGS Toolbox Beta" tool panel exactly like the
> usegalaxy.org. How can I achieve this?
>  I found myself looking for the tools and put them to tool_conf.xml which
> is very tedious.
> Is there a better way to do it?
>
>
> Best,
> Huayan
>
>
> On Thu, Mar 20, 2014 at 11:43 AM, Huayan Gao <huayan...@gmail.com> wrote:
>
>> Thanks Martin!
>>
>> One more question, I want to install all the migrated tools from stage 9,
>> that is NGS tools to my local galaxy. I tried but always got some problems.
>>  Do you have the instructions on wiki too?
>>
>> Thanks,
>> Huayan
>>
>>
>> On Thu, Mar 20, 2014 at 10:27 AM, Martin Čech <mar...@bx.psu.edu> wrote:
>>
>>> Hello again Huayan,
>>>
>>> the page got renamed and redirect was not in place. I have put it there
>>> and the new page has even more info on it! :)
>>>
>>> thank you for using Galaxy!
>>>
>>> Martin
>>>
>>>
>>> On Wed, Mar 19, 2014 at 10:18 PM, Martin Čech <mar...@bx.psu.edu> wrote:
>>>
>>>> Hello Huayan,
>>>>
>>>> I don't know why the wiki page disappeared and I will investigate it.
>>>> In the meantime I have found a cached copy for you:
>>>> http://webcache.googleusercontent.com/search?q=cache:SWWpt6XsmCkJ:https://wiki.galaxyproject.org/Admin/NGS%2520Local%2520Setup+&cd=1&hl=en&ct=clnk&gl=us
>>>>
>>>> Martin, Galaxy team
>>>>
>>>>
>>>> On Wed, Mar 19, 2014 at 9:44 PM, Huayan Gao <huayan...@gmail.com>wrote:
>>>>
>>>>> Hi,
>>>>>
>>>>> I wanted to use bowtie2 and tophat2 locally. I remembered you have
>>>>> instructions about how to set up the library here, but it is not 
>>>>> accessible
>>>>> any more.
>>>>> https://wiki.galaxyproject.org/Admin/NGS%20Local%20Setup
>>>>>
>>>>> Can you direct me to the right page or send me the documents please?
>>>>>
>>>>> Thanks,
>>>>> Huayan
>>>>>
>>>>> ___________________________________________________________
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>>>>>
>>>>
>>>>
>>>
>>
>
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