When I run CloudMap EMS Variant Density Mapping workflow (takes VCF of
heterozygous and homozygous variants to subtract) (imported from uploaded file)
on local Galaxy instance, I got this
, when I wanted to edit the workflow. Also, I got this
The following tools are beinge executed with a different version from what was
available when this workflow was last saved because the previous version is no
longer available for use on this galaxy instance. To upgrade your workflow and
dismiss this message simply edit the workflow and re-save it to update the
stored tool version.
* toolshed.g2.bx.psu.edu/repos/devteam/sam_to_bam/sam_to_bam/1.1.2: using
version '1.1.2' instead of version '1.1.3' indicated in this workflow.
* ,when I wanted to run the workflow.
I know it is the problem with version of SAM-to-BAM. But, when I searched the
Tool sheds > Search and browse tool sheds, there is only version 1.1.4 for
SAM-to-BAM. When I tried to edit the workflow from Workflow > ...> Edit, I did
not find where could I change the version of SAM-to-BAM. When I clicked on
SAM-to-BAM on the Workflow Canvas, it showed the version is 1.1.3 for it.
Could you tell me which version do I need exactly, and how to figure out this?
Thanks a lot!
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