Anyone please?? I cannot even start the galaxy server. Makes me wonder if 
something in the database got messed up.
On Apr 4, 2014, at 11:16 AM, Ravi Alla <ravi.a...@berkeley.edu> wrote:

> Hi devs,
> I deleted a tool called upload_local_file and tried to restart galaxy server 
> but I keep getting the following error. Any idea how to solve this?
> 
>  File 
> "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/webapps/galaxy/buildapp.py", 
> line 39, in app_factory
>     app = UniverseApplication( global_conf = global_conf, **kwargs )
>   File "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/app.py", line 130, in 
> __init__
>     self.job_manager = manager.JobManager( self )
>   File "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/jobs/manager.py", line 
> 37, in __init__
>     self.job_handler.start()
>   File "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/jobs/handler.py", line 
> 35, in start
>     self.job_queue.start()
>   File "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/jobs/handler.py", line 
> 78, in start
>     self.__check_jobs_at_startup()
>   File "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/jobs/handler.py", line 
> 109, in __check_jobs_at_startup
>     JobWrapper( job, self ).fail( 'This tool was disabled before the job 
> completed.  Please contact your Galaxy administrator.' )
>   File "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/jobs/__init__.py", line 
> 761, in fail
>     self.app.object_store.update_from_file(dataset.dataset, create=True)
>   File 
> "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/objectstore/__init__.py", line 
> 349, in update_from_file
>     self.create(obj, **kwargs)
>   File 
> "/srv/www/galaxy/source/galaxy-dist/lib/galaxy/objectstore/__init__.py", line 
> 298, in create
>     open(path, 'w').close()  # Should be rb?
> IOError: [Errno 2] No such file or directory: 
> '/global/scratch/galaxy/webapp/files/000/dataset_194.dat'
> 
> Thanks
> Ravi

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