I've noticed that $GALAXY_SLOTS that was always set to 1 when using LSF.
It turns out that LSF specifies the number of parallel slots using
$LSB_DJOB_NUMPROC env variable which isn't checked in
diff that describes the fix is attached.
diff -r 61a3094bd3ed
Wed May 14 12:15:54 2014 -0400
Thu May 15 16:12:04 2014 -0400
@@ -8,6 +8,8 @@
elif [ -f "$PBS_NODEFILE" ]; then
GALAXY_SLOTS=`wc -l < $PBS_NODEFILE`
+elif [ -n "$LSB_DJOB_NUMPROC" ]; then
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