Hi Eric,
It's not broken per se but the documentation is lacking on this front. You
need to route your /galaxy/api folder to a proxy that does not require
authentication. Maybe this isn't the best way but it works for AAFC's
production galaxy. See my apache configuration file below:
--------------------------------------------------------------------------------------
# Function for LowerCase conversion used in rewriterule directive
RewriteMap lc int:tolower
# Setup the load balancer and force LDAP authentication with group file
authorization
<Proxy balancer://galaxy-prod/*>
BalancerMember http://localhost:60000
BalancerMember http://localhost:60001
BalancerMember http://localhost:60002
# LDAP based authentication
AuthName "Galaxy - Login with AAFC credentials"
AuthType Basic
AuthBasicAuthoritative off
AuthBasicProvider ldap
AuthLDAPURL "REDACTED"
AuthLDAPBindDN 'REDACTED'
AuthLDAPBindPassword "REDACTED"
# File based authorization
AuthGroupFile /home/galaxy/permitted_users
Require group galaxy-users
RewriteEngine on
# Convert the sAMAccountName to lower case
RewriteRule ^ -
[E=AUTHENTICATE_sAMAccountName:${lc:%{ENV:AUTHENTICATE_sAMAccountName}}]
# Set the REMOTE_USER header to the contents of the LDAP query
response's "sAMAccountName" attribute
RequestHeader set REMOTE_USER %{AUTHENTICATE_sAMAccountName}e
</Proxy>
<Proxy balancer://galaxy-prod-noauth/*>
BalancerMember http://localhost:60000
BalancerMember http://localhost:60001
BalancerMember http://localhost:60002
# Required to allow unauthenticated access
# Not clear why this is so
Satisfy any
</Proxy>
# Bypass authentication for the api endpoints when a "key" get variable is
provided by proxying directly to the galaxy web server
RewriteCond %{QUERY_STRING} key=
RewriteRule ^/galaxy/api/(.*) balancer://galaxy-prod-noauth/api/$1 [P]
# Bypass authentication for display servers
RewriteCond HTTP_HOST =hgw1.cse.ucsc.edu [OR,NC]
RewriteCond HTTP_HOST =hgw2.cse.ucsc.edu [OR,NC]
RewriteCond HTTP_HOST =hgw3.cse.ucsc.edu [OR,NC]
RewriteCond HTTP_HOST =hgw4.cse.ucsc.edu [OR,NC]
RewriteCond HTTP_HOST =hgw5.cse.ucsc.edu [OR,NC]
RewriteCond HTTP_HOST =hgw7.cse.ucsc.edu [OR,NC]
RewriteCond HTTP_HOST =hgw8.cse.ucsc.edu [NC]
RewriteRule ^/galaxy/root/display_as(.*)
balancer://galaxy-prod-noauth/root/display_as$1 [P]
# Serve static content directly from apache
RewriteRule ^/galaxy/static/style/(.*)
/home/galaxy/galaxy-dist/static/june_2007_style/blue/$1 [L]
RewriteRule ^/galaxy/static/scripts/(.*)
/home/galaxy/galaxy-dist/static/scripts/packed/$1 [L]
RewriteRule ^/galaxy/static/(.*) /home/galaxy/galaxy-dist/static/$1 [L]
RewriteRule ^/galaxy/favicon.ico /home/galaxy/galaxy-dist/static/favicon.ico [L]
RewriteRule ^/galaxy/robots.txt /home/galaxy/galaxy-dist/static/robots.txt [L]
# Route all other traffic through the load balancer
RewriteRule ^/galaxy/(.*)$ balancer://galaxy-prod/$1 [P]
------------------------------------------------------------------------------
Regards,
Iyad Kandalaft
Microbial Biodiversity Bioinformatics
Agriculture and Agri-Food Canada | Agriculture et Agroalimentaire Canada
960 Carling Ave.| 960 Ave. Carling
Ottawa, ON| Ottawa (ON) K1A 0C6
E-mail Address / Adresse courriel [email protected]
Telephone | Téléphone 613-759-1228
Facsimile | Télécopieur 613-759-1701
Teletypewriter | Téléimprimeur 613-773-2600
Government of Canada | Gouvernement du Canada
-----Original Message-----
From: [email protected]
[mailto:[email protected]] On Behalf Of Eric Rasche
Sent: Wednesday, June 11, 2014 8:43 PM
To: [email protected]
Subject: [galaxy-dev] bug: API broken under remote_user
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
https://trello.com/c/AGKePuHZ/1630-expose-use-remote-user-via-configuration-api
I don't know if this is the correct card (it's been a long day and I may be
misreading it) but the API is completely broken under REMOTE_USER
authentication.
running ./scripts/api/display.py {key} http://localhost:8300 returns 403
forbidden.
running ./scripts/api/display.py {key} https://fqdn/galaxy/ returns 401
Authorization Required
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