Dear all

Am I right in thinking that, although the current 'bowtie_wrappers' package from the toolshed creates the file


        .../galaxy-dist/tool-data/bowtie_indices.loc

no data is ever actually loaded from this file (and so any entries added to it are ignored)?

Empirically, it appears only entries in the .loc file under

        
.../galaxy-dist/tool-data/toolshed.g2.bx.psu.edu/repos/devteam/bowtie_wrappers/9ca609a2a421/

are actually used to populate the relevant menu in the "bowtie for illumina" tool.

Is there a reason why the redundant file is still created?

Thanks, best wishes

Peter

Ps this is in galaxy-dist changeset 14355:007f6a80629a

--
Peter Briggs peter.bri...@manchester.ac.uk
Bioinformatics Core Facility University of Manchester
B.1083 Michael Smith Bldg Tel: (0161) 2751482
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