That solves it. What I ended up doing (since my install is pretty old now) was
to symlink the galaxy-dist/universe_wsgi.ini to galaxy-dist/config/galaxy.ini
and then the script started working.
> On 9/06/2015, at 3:15 pm, Martin Čech <mar...@bx.psu.edu> wrote:
> The script by default expects Galaxy config to be at config/galaxy.ini if you
> have Galaxy config in a diffferent place you can use the --config flag to
> specify path to it.
> The config location has been recently changed (from galaxy root folder and a
> different filename) - that is why the defaults are different then your setup.
> Sorry for the inconvenience.
> On Mon, Jun 8, 2015 at 9:43 PM Shane Sturrock <sh...@biomatters.com
> <mailto:sh...@biomatters.com>> wrote:
> I recently updated our server to the latest release and have just had a user
> who ran up a lot of space and isn’t seeing it come back when she purges her
> data. I’ve tried using the set_user_disk_usage.py script as I’ve previously
> done to resolve this but now it is failing with the following:
> (galaxy_env)[galaxy@galaxy scripts]$ ./set_user_disk_usage.py
> Loading Galaxy model...
> Traceback (most recent call last):
> File "./set_user_disk_usage.py", line 85, in <module>
> model, object_store, engine = init()
> File "./set_user_disk_usage.py", line 43, in init
> for key, value in config_parser.items( "app:main" ):
> File "/usr/lib64/python2.6/ConfigParser.py", line 565, in items
> raise NoSectionError(section)
> ConfigParser.NoSectionError: No section: ‘app:main'
> Do I need a newer python or is this a bug/regression?
> Dr. Shane Sturrock
> Senior Scientist
> shane.sturr...@biomatters.com <mailto:shane.sturr...@biomatters.com> | P: +64
> 9 379 5064
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Dr. Shane Sturrock
shane.sturr...@biomatters.com | P: +64 9 379 5064
Please keep all replies on the list by using "reply all"
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