Unfortunately there is nothing about the tool shed install process
that requires the install procedures to result in portable
environments. So yeah - if it all possible I would take Will's advice
and preserve absolute paths.

-John

On Wed, Sep 9, 2015 at 7:10 PM, Will Holtz <who...@lygos.com> wrote:
> Can you move the folder to a new drive, but mount that new drive at the same
> place within the filesystem?
>
> -Will
>
> On Wed, Sep 9, 2015 at 10:49 AM, Dooley, Damion <damion.doo...@bccdc.ca>
> wrote:
>>
>> On a VM I moved the tool_dependency_dir folder to another mount since it
>> was getting so large that the smallish main mount was full (and changed
>> galaxy.ini, restarted galaxy, and checked that permissions were appropriate
>> for galaxy user).  But I'm finding I have to reinstall various tool
>> dependencies (prokka etc) to enable galaxy to find the command line
>> executables.  Is there a trick to getting the tool dependencies working
>> again after moving the folder wholesale?
>>
>> Thanks,
>>
>> Damion
>>
>> Hsiao lab, BC Public Health Microbiology & Reference Laboratory, BC Centre
>> for Disease Control
>> 655 West 12th Avenue, Vancouver, British Columbia, V5Z 4R4 Canada
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