Hi,

MySQL:
Server version: 5.5.44-0ubuntu0.14.04.1 (Ubuntu)

MySQL-GalaxyDB Encoding: UTF8

Galaxy: Where can I find the current release und changeset of my Galaxy 
Instance?

Mit freundlichen Grüßen
Matthias Enders
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GERMAN SEED ALLIANCE GmbH
c/o Norddeutsche Pflanzenzucht
Hans-Georg Lembke KG
Hohenlieth, 24363 Holtsee
Tel.: +49 (0)4351/ 736-189
Fax: + 49 (0)4351/ 736-271
Mobil: +49 (0)151/ 14247360

Email: m.end...@german-seed-alliance.de<mailto:m.end...@german-seed-alliance.de>

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Amtsgericht Köln, HRB 73844

Von: Dannon Baker [mailto:dannon.ba...@gmail.com]
Gesendet: Thursday, September 10, 2015 4:53 PM
An: Matthias Enders <m.end...@german-seed-alliance.de>
Cc: galaxy-dev@lists.galaxyproject.org
Betreff: Re: [galaxy-dev] Fatal Error while uploading a File with special 
Characters

Thanks.  Can you specify exactly which release (or even the exact changeset) of 
the galaxy revision you're running, and what encoding the database is currently 
set to?  I've reproduced the error with the latest galaxy release, mysql 5.6.26 
(utf8 encoding) and will get a fix out shortly, but I want to make sure I'm 
testing your situation as well.

On Thu, Sep 10, 2015 at 10:14 AM, Matthias Enders 
<m.end...@german-seed-alliance.de<mailto:m.end...@german-seed-alliance.de>> 
wrote:
It was the name of the File:

Blühzeitpunkt.txt

(for example)

Von: Dannon Baker [mailto:dannon.ba...@gmail.com<mailto:dannon.ba...@gmail.com>]
Gesendet: Thursday, September 10, 2015 4:12 PM
An: Matthias Enders 
<m.end...@german-seed-alliance.de<mailto:m.end...@german-seed-alliance.de>>
Cc: 
galaxy-dev@lists.galaxyproject.org<mailto:galaxy-dev@lists.galaxyproject.org>
Betreff: Re: [galaxy-dev] Fatal Error while uploading a File with special 
Characters

You should definitely not have to purge a user to fix this (not that it should 
happen in the first place).  Was it the file with special characters, or the 
name of the file?



On Thu, Sep 10, 2015 at 2:28 AM, Matthias Enders 
<m.end...@german-seed-alliance.de<mailto:m.end...@german-seed-alliance.de>> 
wrote:
Dear Galaxy Community,

a User of our Galaxy Platform has produced a fatal error by uploading a file 
containing a German special character  (ä / ü / ö / ß). This resulted in the 
following status (only for the given user):

- Upload was canceled: Status was "Failed Internal Server Error (500)"
- All Histories were corrupt stating: "An error was encountered while loading 
the contents."
- Tools can´t be used an stating (in Traceback):
" UnicodeDecodeError: 'utf8' codec can't decode byte 0xfc in position 5: 
invalid start byte"
"Module weberror.evalexception.middleware:364 in respond"


This totally destroyed to current user and we have had to purge him in order to 
get him back to work, even losing all his datasets & histories!

We are using an MySQL database as a backend. Is the Encoding of this database 
the problem? If yes: Which encoding is used/supported by galaxy?

Thanks in advance!

Matthias
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