Hello,
I installed FastQC (~/shed_tools/toolshed.g2.bx.psu.edu/repos/*devteam*
/fastqc/*2d094334f61e*/

*FastQC ).*
However, I got the following error while running it:


*Fatal error: Exit code 1 () Traceback (most recent call last): File
"/home/lorencm/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/fastqc/2d094334f61e/fastqc/rgFastQC.py
<http://toolshed.g2.bx.psu.edu/repos/devteam/fastqc/2d094334f61e/fastqc/rgFastQC.py>",
line 157, in <module> assert os.path.isfile(opts.executable),'##rgFastQC.py
error - cannot find executable %s' % opts.executable AssertionError:
##rgFastQC.py error - cannot find executable /fastqc*

The Fastqc package seems to be correctly installed:























*~/galaxy/tool_dependency/FastQC/0.11.2/devteam/package_fastqc_0_11_2/4b65f6e39cb0
> ls -1 -ahltotal 824Kdrwxrwxr-x 8 lorencm lorencm 4.0K Nov  4 02:21
.drwxrwxr-x 3 lorencm lorencm 4.0K Nov  4 02:21 ..drwxrwxr-x 2 lorencm
lorencm 4.0K Nov  4 02:21 Configuration-rwxrwxr-x 1 lorencm lorencm  251
Nov  4 02:21 env.sh-rwxr-xr-x 1 lorencm lorencm  13K Nov  4 02:21
fastqc-rw-rw-r-- 1 lorencm lorencm 2.2K Nov  4 02:21
fastqc_icon.icodrwxrwxr-x 5 lorencm lorencm 4.0K Nov  4 02:21
Help-rw-rw-r-- 1 lorencm lorencm 5.5K Nov  4 02:21 INSTALL.txt-rw-rw-r-- 1
lorencm lorencm  49K Nov  4 02:21 jbzip2-0.9.jar-rw-rw-r-- 1 lorencm
lorencm  35K Nov  4 02:21 LICENSE.txtdrwxrwxr-x 3 lorencm lorencm 4.0K Nov
4 02:21 netdrwxrwxr-x 3 lorencm lorencm 4.0K Nov  4 02:21 org-rw-rw-r-- 1
lorencm lorencm 2.1K Nov  4 02:21 README.txt-rw-rw-r-- 1 lorencm lorencm
32K Nov  4 02:21 RELEASE_NOTES.txt-rw-rw-r-- 1 lorencm lorencm  101 Nov  4
02:21 run_fastqc.bat-rw-rw-r-- 1 lorencm lorencm 630K Nov  4 02:21
sam-1.103.jardrwxrwxr-x 3 lorencm lorencm 4.0K Nov  4 02:21
Templatesdrwxrwxr-x 3 lorencm lorencm 4.0K Nov  4 02:21 uk*
What do I miss out?

Thank you in advance.

Mic
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