Hi Michael,

can you deprecate it? Than it's not listed in the search.

Would be awesome! Thanks!
Bjoern

Am 16.01.2016 um 10:45 schrieb Michael R. Crusoe:
> Björn,
> 
> Should I delete my old repo?
> 
> On Fri, Jan 15, 2016 at 10:26 PM Björn Grüning <bjoern.gruen...@gmail.com>
> wrote:
> 
>> Hi Brad,
>>
>> can you please try the IUC version of khmer?
>>
>> Thanks,
>> Bjoern
>>
>> Am 15.01.2016 um 20:02 schrieb Langhorst, Brad:
>>> Hi:
>>> I just tried to install khmer from the toolshed.
>>> I don’t think it’s installing correctly  - but I don’t know if it’s a
>> tool problem or something with my setup.
>>>
>>> the tool-dep directory has
>>> khmer/2.0/crusoe/package_khmer_2_0/c7702a7d26e8/
>>> but it’s empty.
>>>
>>>
>>> This tool has a package dependency like this:
>>>
>>> <?xml version="1.0"?>
>>> <tool_dependency>
>>>     <package name="khmer" version="2.0">
>>>         <install version="1.0">
>>>     <actions>
>>>     <action type="setup_python_environment">
>>>     <repository changeset_revision="5caf592bb259"
>> name="package_python_2_7" owner="iuc" toolshed="
>> https://toolshed.g2.bx.psu.edu";>
>>> <package name="python" version="2.7" />
>>> </repository>
>>> <package>
>> https://pypi.python.org/packages/source/k/khmer/khmer-2.0.tar.gz#md5=1f610abd021254e21b082179a100cd39
>> </package>
>>> </action>
>>>             </actions>
>>>         </install>
>>>     </package>
>>> </tool_dependency>
>>>
>>> what does that fragment tag mean?
>>> How does this work.
>>> Do I have to set up something to deal with making a python environment?
>>>
>>> It also uses this @BINARY@ variable that I have not seen before. galaxy
>> search for ‘@BINARY@‘ turns up nothing.
>>> Can anybody point me in the right direction here?
>>>
>>> Thanks!
>>>
>>>
>>>
>>> Brad
>>>
>>> —
>>> Brad Langhorst, Ph.D.
>>> Development Scientist
>>> New England Biolabs
>>>
>>>
>>>
>>>
>>>
>>>
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