There is no option to enable this automatically. There is not ability
to modify this via the API (though I created an issue here
https://github.com/galaxyproject/galaxy/issues/1842).

I guess what I would do to implement this is to refactor places where
trans.user.stored_workflow_menu_entries is read specifically to use a
new method - like trans.users_stored_workflow_menu_entries(). Then add
a config option that just swapped this to read non-deleted workflows
of the user instead of the explicitly marked ones. I'd +1 a clean
implementation of that if you have some available developer time to
take a crack at that. If there isn't time to work on it but others
think it would be useful, I'd encourage creating an issue for this -
https://github.com/galaxyproject/galaxy/issues/new.

-John

On Tue, Mar 1, 2016 at 1:19 PM, Cameron Jack <cameron.j...@anu.edu.au> wrote:
> Hi all,
>
>
> In the /workflow/configure_menu screen there is an tickbox option for each
> installed workflow to "show in menu". Is there a way I could enable this by
> default, or in code via bioblend  (couldn't see any hint of this in the
> docs)? Perhaps I could extend bioblend to do this?
>
>
> Cheers,
>
> Cam
>
>
> Cameron Jack
>
> Acting Manager & Bioinformatician
> ANU Bioinformatics Consultancy
> The Australian National University
>
> The John Curtin School of Medical Research
> Building 131 Garran Road
> Acton 0200, ACT
>
> Ph (office): +61 2 612 51128
> Ph (mobile): +61 4 2368 0745
> Email: cameron.j...@anu.edu.au
> Group email: a...@anu.edu.au
>
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