If you have a system that works, I don't see a need to change it. But yes,
it's the Galaxy install is a clone of the repo so git pull will do the
trick.

On Fri, Sep 16, 2016 at 9:24 AM, Lapointe, David <david.lapoi...@tufts.edu>
wrote:

> Yes that looks good.  The git pull will work on top of the AMI (16.04)?
>  I don't think that I need cloudman to stop/start, just supervisorctl,
> which I have been using to manage galaxy.
>
> Thanks
>
> David
>
> --
> David Lapointe Ph.D.
> Sr. Bioinformatics Specialist
> Research Technology (RT)
> Tufts Technology Services (TTS)
> 16 Dearborn Road
> Somerville MA 02144
>
> Phone:  617-627-5319
> Fax: 617-627-3667
> http://it.tufts.edu
>
> From: Enis Afgan <enis.af...@irb.hr>
> Date: Thursday, September 15, 2016 at 5:30 PM
>
> To: David Lapointe <david.lapoi...@tufts.edu>
> Cc: "galaxy-dev@lists.galaxyproject.org" <galaxy-dev@lists.
> galaxyproject.org>
> Subject: Re: [galaxy-dev] Modifying a Cloud Cluster Instance
>
> Give you seemingly have a custom deployment, a manual upgrade is probably
> best. Instructions are available here: https://wiki.
> galaxyproject.org/CloudMan/Services/Galaxy#Updating_Galaxy_source
>
> We'll get the 16.07 release done too but juding by the way things look, it
> won't be until the next month.
>
> On Wed, Sep 14, 2016 at 11:23 AM, Lapointe, David <
> david.lapoi...@tufts.edu> wrote:
>
>> Hi Enis,
>>
>> Yes I figured what I was doing wrong. Using Cloudman to restart services
>> overwrote my confs.   Using the CLI to manage services keeps everything in
>> place, though I would like to figure out what is the optimal way to move to
>> 16.07. Wait for the AMI or update?
>> --
>> David Lapointe Ph.D.
>> Sr. Bioinformatics Specialist
>> Research Technology (RT)
>> Tufts Technology Services (TTS)
>> 16 Dearborn Road
>> Somerville MA 02144
>>
>> Phone:  617-627-5319
>> Fax: 617-627-3667
>> http://it.tufts.edu
>>
>> From: Enis Afgan <enis.af...@irb.hr>
>> Date: Wednesday, September 14, 2016 at 11:01 AM
>> To: David Lapointe <david.lapoi...@tufts.edu>
>> Cc: "galaxy-dev@lists.galaxyproject.org" <galaxy-dev@lists.galaxyprojec
>> t.org>
>> Subject: Re: [galaxy-dev] Modifying a Cloud Cluster Instance
>>
>> Hi David,
>> I totally missed this email from you - apologies! Are you still trying to
>> do this or did you figure it out? Following the general guidelines on
>> customizing the instance is a good place to start. There is an option in
>> CloudMan to turn on non-signed SSL (from the Admin page) but the steps
>> performed may be useful in trying to do the same manually. I believe it's
>> necessary to just update and reload the Nginx configuration. A template can
>> be found here https://github.com/galaxyproject/cloudman/blob/8db478a8
>> d777bcc48ed8c838f1f9de8519a11e60/cm/conftemplates/nginx_
>> server_ssl.default
>>
>> Hope this helps and, again, sorry for not getting back to you earlier.
>>
>>
>> On Thu, Aug 11, 2016 at 2:30 PM, Lapointe, David <
>> david.lapoi...@tufts.edu> wrote:
>>
>>> This is on Amazon I should add.
>>> --
>>> David Lapointe Ph.D.
>>> Sr. Bioinformatics Specialist
>>> Research Technology (RT)
>>> Tufts Technology Services (TTS)
>>> 16 Dearborn Road
>>> Somerville MA 02144
>>>
>>> Phone:  617-627-5319
>>> Fax: 617-627-3667
>>> http://it.tufts.edu
>>>
>>> From: galaxy-dev <galaxy-dev-boun...@lists.galaxyproject.org> on behalf
>>> of David Lapointe <david.lapoi...@tufts.edu>
>>> Date: Thursday, August 11, 2016 at 1:44 PM
>>> To: "galaxy-dev@lists.galaxyproject.org" <galaxy-dev@lists.galaxyprojec
>>> t.org>
>>> Subject: [galaxy-dev] Modifying a Cloud Cluster Instance
>>>
>>> I have  a Cloudman instance up and running, but I would like to add SSL
>>> ( I have a signed cert and key ) and productionize it.  I see several
>>> methods documented,but it's not clear which one is preferred: edit in place
>>> then persist changes and restart  (wiki/Cloudman/CustomizeGalaxyCloud)
>>> seems best to me. Any advice?
>>>
>>> Thanks
>>>
>>> David
>>> --
>>> David Lapointe Ph.D.
>>> Sr. Bioinformatics Specialist
>>> Research Technology (RT)
>>> Tufts Technology Services (TTS)
>>> 16 Dearborn Road
>>> Somerville MA 02144
>>>
>>> Phone:  617-627-5319
>>> Fax: 617-627-3667
>>> http://it.tufts.edu
>>>
>>> ___________________________________________________________
>>> Please keep all replies on the list by using "reply all"
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>>> To search Galaxy mailing lists use the unified search at:
>>>   http://galaxyproject.org/search/mailinglists/
>>>
>>
>>
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