Hi,
I have a tool that produces multiple output files a log file, two bam
files. (https://github.com/nugentechnologies/nudup)
The tool it self provides an option called --out to specify a path to a
directory with a prefix that will be added to the output files:
--out /tmp/out
this will produce 3 files:
/tmp/out_dup_log.txt
/tmp/out.sorted.dedup.bam
/tmp/out.sorted.markdup.bam
so my question is if this out prefix will give me problems overwriting
next output files coming from this tool?
Cheers Jochen
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