I'm a new user of Galaxy. I have been exploring the things and trying to
use the Docker image of Galaxy. Eventually, I am planning to run the docker
container on our local Cluster.
I was wondering if there's any way to include local tools with the
Dockerfile. For example using the Docker image of Galaxy at
https://github.com/bgruening/docker-galaxy-stable it shows how to include
the tools to the Docker image of Galaxy from the Galaxy tool shed as
RUN install-repository \
"--url https://toolshed.g2.bx.psu.edu/ -o iuc --name package_numpy_1_7"
"--url https://toolshed.g2.bx.psu.edu/ -o iuc --name
This command will pull the tools from the Galaxy tool shed and install
inside the docker container. But, is there's any similar way to include my
own local tools?
*Md. Rezaul Karim*, BSc, MSc
PhD Researcher, INSIGHT Centre for Data Analytics
National University of Ireland, Galway
IDA Business Park, Dangan, Galway, Ireland
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at: