Hi all,

When attempting to start up Galaxy, via the run.sh script, we’re getting the 
following error:

galaxyd@genomics:/galaxy$ sh run.sh
Activating virtualenv at .venv
Requirement already satisfied: pip>=8.1 in ./.venv/lib/python2.7/site-packages
Double requirement given: Tempita==0.5.3.dev0 (from -r requirements.txt (line 
155)) (already in Tempita==0.5.3dev (from -r requirements.txt (line 57)), 
name='Tempita')

This occurs when the start up script is run with the —no-create-venv and 
without the flag. It looks like there are two “Tempita” items in the 
requirements.txt, if one of them is removed, it leads to another error about 
“ethtools”

galaxyd@genomics:/galaxy$ sh run.sh --daemon --no-create-venv
Activating virtualenv at .venv
Requirement already satisfied: pip>=8.1 in ./.venv/lib/python2.7/site-packages
...
Collecting crypto==1.4.1 (from -r requirements.txt (line 81))
  Using cached crypto-1.4.1-py2.py3-none-any.whl
Requirement already satisfied: cycler==0.10.0 in 
./.venv/lib/python2.7/site-packages (from -r requirements.txt (line 82))
Collecting Cython==0.25.2 (from -r requirements.txt (line 83))
  Using cached Cython-0.25.2-cp27-cp27mu-manylinux1_x86_64.whl
Requirement already satisfied: docopt==0.6.2 in 
./.venv/lib/python2.7/site-packages (from -r requirements.txt (line 86))
Requirement already satisfied: drmaa==0.7.6 in 
./.venv/lib/python2.7/site-packages (from -r requirements.txt (line 88))
Collecting ethtool==0.8 (from -r requirements.txt (line 90))
  Could not find a version that satisfies the requirement ethtool==0.8 (from -r 
requirements.txt (line 90)) (from versions: )
No matching distribution found for ethtool==0.8 (from -r requirements.txt (line 
90))

We’re not sure if both versions of “Tempita” are required and if they are, how 
can the application be started up? Running both the run.sh and the 
run_reports.sh scripts lead to this error about “Tempita”. Has anyone 
encountered this error before?

Thanks!
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