Has anyone seen a similar error like this before. We are unsure if
galaxy is causing the issue or it is being cuased by slurm as it seems
galaxy is prematurely deleting a file.
galaxy.jobs.runners DEBUG 2017-06-14 19:36:45,719 (3261/143577) Unable
to cleanup
/cm/shared/apps/galaxy/prod/galaxy/database/jobs_directory/003/3261/galaxy_3261.ec:
[Errno 2] No such file or directory:
'/cm/shared/apps/galaxy/prod/galaxy/database/jobs_directory/003/3261/galaxy_3261.ec'
galaxy.jobs.output_checker DEBUG 2017-06-14 19:36:45,725 Tool produced
standard error failing job - [slurmstepd: get_exit_code task 0 died by
signal
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/
