Hi Hakeem,
since you are using:

<login-use-username>True</login-use-username>

you need to use your username without the "@mydomain.com" for the first login. After the first successful login, Galaxy will store the email associated to your username on the AD server in its user database and you will be able to use it as an alternative to your username to login.

Cheers,
Nicola

On 12/11/17 10:46, Hakeem Almabrazi wrote:

HI Nicola,

Thank you for your response.  I have added your suggestions but still I am getting the same error; the username is None if I used the [email protected] <mailto:[email protected]> as a login in the login page.  Here is the error log I keep getting.

galaxy.webapps.galaxy.controllers.user DEBUG 2017-11-12 13:35:38,507 trans.app.config.auth_config_file: ./config/auth_conf.xml

galaxy.auth.providers.ldap_ad DEBUG 2017-11-12 13:35:38,507 LDAP authenticate: email is [email protected]

galaxy.auth.providers.ldap_ad DEBUG 2017-11-12 13:35:38,507 LDAP authenticate: username is None

galaxy.auth.providers.ldap_ad DEBUG 2017-11-12 13:35:38,507 LDAP authenticate: options are {'bind-user': '{sAMAccountName}@research.sidra.local', 'search-fields': 'sAMAccountName,mail', 'login-use-username': 'True', 'allow-register': 'False', 'auto-register-email': '{mail}', 'server': ' myAD.mydomain.example.local ', 'auto-register': 'True', 'search-base': 'cn=Users,dc=mydomian,dc=example,dc=local', 'auto-register-username': '{sAMAccountName}', 'search-password': 'PASSWORD', 'search-user': '[email protected]', 'bind-password': '{password}', 'allow-password-change': 'False'}

galaxy.auth.providers.ldap_ad DEBUG 2017-11-12 13:35:38,508 LDAP authenticate: username must be used to login, cannot be None

And here is my updated auth_config.xml file

<?xml version="1.0"?>

<auth>

<authenticator>

<type>ldap</type>

<options>

<allow-register>False</allow-register>

<auto-register>True</auto-register>

<allow-password-change>False</allow-password-change>

<server>myAD.mydomain.example.local</server>

<login-use-username>True</login-use-username>

<search-fields>sAMAccountName,mail</search-fields>

 <search-base>cn=Users,dc=mydomain,dc=example,dc=local</search-base>

<search-user>[email protected]</search-user>

<search-password>PASSWORD</search-password>

<bind-user>{sAMAccountName}@mydomain.example.local</bind-user>

<bind-password>{password}</bind-password>

<auto-register-username>{sAMAccountName}</auto-register-username>

<auto-register-email>{mail}</auto-register-email>

</options>

</authenticator>

<authenticator>

<type>localdb</type>

<options>

<allow-password-change>true</allow-password-change>

</options>

</authenticator>

</auth>

I will appreciate it if you think the file looks okay to you.

Thank you

*Hakeem Almabrazi*

Senior Software Architect

*Sidra Medical and Research Center*

Out-Patient Clinic

PO Box 26999 , Al Luqta Street
Education City North Campus
Qatar Foundation

*Tel:+974-4003-7458 (ext:37458)**|**Mobile:* +974-7479-4201

[email protected] <mailto:[email protected]> *|*www.sidra.org <http://www.sidra.org/>

Description: C:\Users\fgenevieve\AppData\Local\Microsoft\Windows\Temporary Internet Files\Content.Outlook\O53SYTUP\Sidra-Logo-Member of QF Short.PNG

*From:*Nicola Soranzo [mailto:[email protected]] *On Behalf Of *Nicola Soranzo
*Sent:* Thursday, November 09, 2017 5:44 PM
*To:* Hakeem Almabrazi; [email protected]
*Subject:* Re: [galaxy-dev] Active Directory Authentication question

Hi Hakeem,
a couple of suggestions:
- allow-register should be False
- I don't see a line with something like <server>ldap://dc1.example.com</server> , but I suppose you have omitted it - if your AD server doesn't allow anonymous searches (like in my case), you need to specify also:

<search-user>cn=jsmith,ou=People,dc=domain,dc=com</search-user>
<search-password>mysecret</search-password>

- you definitely need to specify an adapted version of these:

        <bind-user>{sAMAccountName}@dc1.example.com <mailto:[email protected]></bind-user>
        <bind-password>{password}</bind-password>
<auto-register-username>{sAMAccountName}</auto-register-username>
<auto-register-email>{mail}</auto-register-email>

Hope that helps!

Cheers,
Nicola

On 09/11/17 11:24, Hakeem Almabrazi wrote:

    Hello,

    I have installed the latest galaxy and I would like to use the MS
    Active Directory 2012 for authentication.  I tried to follow the
    instructions outlined here
    https://galaxyproject.org/admin/config/external-user-auth/ without
    touching the lib/galaxy/auth/providers/ldap_ad_py since I thought
    this is related to ldap not AD.

    Here is the exact auth_config.xml file

    +++++++++++++++++++++++++

    <?xml version="1.0"?>

    <auth>

    <authenticator>

            <type>ldap</type>

            <options>

    <allow-register>True</allow-register>

    <auto-register>True</auto-register>

    <allow-password-change>False</allow-password-change>

    <login-use-username>True</login-use-username>

                <!-- For Active Directory: -->

    <search-fields>sAMAccountName,mail</search-fields>

    <search-base>dc=dc1,dc=example,dc=com</search-base>

                <!-- If login-use-username is True -->

    
<search-filter>(&amp;(objectClass=user)(sAMAccountName={username}))</search-filter>

          </options>

        </authenticator>

    </auth>

    +++++++++++++++++

    When I try to login using a real user email and pwd, it says “No
    user of valid password” in the Galaxy page.  And here is the error
    log I keep getting.

    galaxy.webapps.galaxy.controllers.user DEBUG 2017-11-09
    13:55:37,940 trans.app.config.auth_config_file: ./config/auth_conf.xml

    galaxy.auth.providers.ldap_ad DEBUG 2017-11-09 13:55:37,940 LDAP
    authenticate: email is [email protected] <mailto:[email protected]>

    galaxy.auth.providers.ldap_ad DEBUG 2017-11-09 13:55:37,940 LDAP
    authenticate: username is None

    galaxy.auth.providers.ldap_ad DEBUG 2017-11-09 13:55:37,940 LDAP
    authenticate: options are {'search-fields': 'sAMAccountName,mail',
    'login-use-username': 'True', 'allow-register': 'True',
    'auto-register': 'True', 'search-base':
    'dc=dc1,dc=example,dc=com', 'search-filter':
    '(&(objectClass=user)(sAMAccountName={username}))',
    'allow-password-change': 'False'}

    galaxy.auth.providers.ldap_ad DEBUG 2017-11-09 13:55:37,940 LDAP
    authenticate: username must be used to login, cannot be None

    galaxy.auth DEBUG 2017-11-09 13:55:37,941 Email: , Username ,
    stopping due to failed non-continue

    Is there anything missing from my auth_config.xml file?

    I appreciate any kind of help figuring this out.

    Best regards,

    Hak

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