Thank you for your time. I got what I was looking for here.

Regards,
Sonali Amonkar
________________________________________
From: Jennifer Jackson [j...@bx.psu.edu]
Sent: Friday, January 14, 2011 8:29 PM
To: Sonali Amonkar
Cc: galaxy-user@lists.bx.psu.edu
Subject: Re: [galaxy-user] Can I create sub workflows in Galaxy?

Hello Sonali,

Please see below for our replies per question.

Thanks!

Jen
Galaxy team

On 1/10/11 8:56 AM, Sonali Amonkar wrote:
> Hi,
>
> Am a newbie to Galaxy and was looking for some basic answers about Galaxy's 
> offerings till date:
>
> 1. Is there any way that I can plug in a small work flow inside another work 
> flow (sub work flow) in Galaxy?
Not at this time.

> 2. Is there any step wise process documented somewhere to install Galaxy on 
> Windows?
Galaxy does not run on Windows. As a work-around, we recommend using
VirtualBox or another virtualization product and running Linux in it.

> 3. Does Galaxy have any commercial support offered?
Not at this time.

> 4. Which languages can the Galaxy tools be built in? (Java, C, C++, etc) ?
Any language is OK, if the following conditions are met:

1. All parameters, including inputs and outputs, need to be able to be
specified on the command line or in a dynamically-generated config file.

2. The program doesn't write anything to STDERR unless it's really an
error.

If either of these are untrue, you may need a wrapper, but it can be
written in anything.

> 5. Does Galaxy have any monitoring tools to keep a check on the process and 
> the statistics at run time?
There's a script at galaxy-dist/scripts/check_galaxy.py that can be used
to check that a Galaxy server is up and able to run jobs.  It is invoked
with:

   % python ./scripts/check_galaxy.py <server>

On first run, it will explain how to store the email and password of the
Galaxy account to use.

There's also a script at galaxy-dist/cron/check_galaxy.sh which is a
wrapper for the python script which can be used with cron.


> Answers to any questions above will be greatly appreciated.
>
> Thank you,
> Sonali Amonkar
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--
Jennifer Jackson
http://usegalaxy.org

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