Yury Bukhman wrote:
> Hi,
> 
> we have set up a Galaxy server for internal use.  We would like to provide 
> indexes for NGS mapping tools for a set of organisms that are relevant to our 
> research.  While bowtie has a repository of such indexes, other tools, e.g. 
> bwa, don't seem to have one, so we have to build our own.  Is there a 
> repository of pre-built indexes for all mapping tools supported by Galaxy 
> somewhere?

Hi Yury,

We are working on setting up a mirror of all of our reference data that
will be accessible via rsync and possibly http.  There'll be an
announcement when this is available.

--nate

> 
> Thanks.
> 
> Yury
> 
> 
> --
> Yury V. Bukhman, Ph.D.
> Associate Scientist, Bioinformatics
> Great Lakes Bioenergy Research Center
> University of Wisconsin - Madison
> 445 Henry Mall, Rm. 513
> Madison, WI 53706, USA
> Phone: 608-890-2680  Fax: 608-890-2427
> Email: ybukh...@glbrc.wisc.edu
> 
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___________________________________________________________
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