On Thu, Apr 14, 2011 at 4:15 PM, Guru Ananda <g...@psu.edu> wrote:
> Hi Peter,
> There isn't a built-in Galaxy tool to compute GC%, yet.

Thanks Guru.

> You could perhaps use UCSC's hgGcPercent binary, which lets you
> compute GC% for BED intervals. You can find the same here:
> http://genome.ucsc.edu/FAQ/FAQdownloads#download27

I'll be working with simple sequence files (FASTA, or even FASTQ,
SFF, etc) rather than BED files, but I'll keep that in mind.


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