Jeremy,
You can definitely ask for new genomes. We frequently add them. This
particular genome is already on my working list--we've run into a bit
of a snag involving permissions and are trying to figure it out. So I
can't promise it will be added or say when if it will be. If you do
want to upload it yourself into your history, you need to get the
FASTA file. Then when you run a mapper, use this FASTA from your
history as the reference file (the run will take longer than it would
with a built-in reference would because it has to index the
reference). If you need more specific details about getting the FASTA,
let us know.
Thanks,
Kelly
On Thu Jun 30, at 3:30 PM, Jeremy Coate wrote:
Greetings,
My apologies for a what is a naive question, but I would like to map
NGS reads to a genome that isn't currently in the list of reference
geneomes (soybean, Glycine max).
To the guys at Galaxy - can this be added to the list? Or can
someone explain to a bioinformatics ignoramus how I would install it
in my history?
Thanks for your help.
Sincerely,
Jeremy Coate
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___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
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