I want to use cufflinks handle the results of Tophat. Cufflinks uses FPKM to 
normalize the expression data. I think FPKM is for pair-end reads. right? My 
reads are single-end. Is it right if I use FPKM?

Thank you very much!

The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:


To manage your subscriptions to this and other Galaxy lists,
please use the interface at:


Reply via email to