Hi guys, So I'm trying to take a bioinformatics pipeline we currently run on our own SGE cluster (which seems to have a lot of customizations ! I'm finding out) and I want to run it on Amazon using CloudMan.
So I'm trying to figure out what the differences are. Here are my questions so far: We seem to have 8 slots per node. Do you guys know if the same is true on CloudMan? I'm assuming more than one submitted qsub job can run on one node at one time? Also is there a way to reserve a certain amount of memory for a job submitted via qsub, or alternatively to request that the job have exclusive access to a node so it keeps all the memory available? Thanks, Greg ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
