hi,
will you please help me how can i fix this error'
thanks

Traceback (most recent call last):
  File "/galaxy-dist/tools/ova/getsitesnotoverlap_tf.py", line 60, in ?
    if __name__ == "__main__": __main__()
  File "/galaxy-dist/tools/ova/getsitesnotoverlap_tf.py", line 50, in __main__
    result_set = connection.execute( "select * from getsitesnotoverlap_tf (" + 
userid + "," + tfid + "," + bpover + "," + ch + "," + sf +")" )
  File 
"/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.4.egg/sqlalchemy/engine/base.py",
 line 824, in execute
    return Connection.executors[c](self, object, multiparams, params)
  File 
"/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.4.egg/sqlalchemy/engine/base.py",
 line 888, in _execute_text
    return self.__execute_context(context)
  File 
"/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.4.egg/sqlalchemy/engine/base.py",
 line 896, in __execute_context
    self._cursor_execute(context.cursor, context.statement, 
context.parameters[0], context=context)
  File 
"/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.4.egg/sqlalchemy/engine/base.py",
 line 950, in _cursor_execute
    self._handle_dbapi_exception(e, statement, parameters, cursor, context)
  File 
"/galaxy-dist/eggs/SQLAlchemy-0.5.6_dev_r6498-py2.4.egg/sqlalchemy/engine/base.py",
 line 931, in _handle_dbapi_exception
    raise exc.DBAPIError.instance(statement, parameters, e, 
connection_invalidated=is_disconnect)
sqlalchemy.exc.ProgrammingError: (ProgrammingError) column "chr1" does not exist
LINE 1: select * from getsitesnotoverlap_tf (6,149,-1000,chr1,tf)
                                                         ^
 'select * from getsitesnotoverlap_tf (6,149,-1000,chr1,tf)' {}
___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

  http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

  http://lists.bx.psu.edu/

Reply via email to