Hi All,

I updated galaxy recently to the latest version. Everything looks fine, except 
snpEff report html view. It was displaying properly (all tables and summary 
values) before the update, but the summary values are not displaying after the 
update. A sample screen-shot is attached for your reference. Could you please 
figure out this issue?

When I ran the same on command line, the reports were generated correctly. I 
assume, something (datatypes or preview) has changed by the update. Please let 
me know the work around on this?

Secondly, as we know, snpEff also generates a gene-wise annotation file along 
with other results, but somehow we cannot access this file through Galaxy. 
Though we see the link in the html report, but it seems the path is broken.

Let me know your suggestions.



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