On Sun, Mar 4, 2012 at 6:34 PM, Hemarajata, Peera <hemar...@bcm.edu> wrote:
> Dear all,
> I’m been trying to get Galaxy to recognize this GFF from NCBI (
> ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Lactobacillus_reuteri_JCM_1112_uid58875/NC_010609.gff)
> but it failed to recognize the format after I uploaded it.

That *could* be because the NCBI's GFF3 is still horrible broken,
but they are working on it and the next release should have
valid GFF which I am looking forward to.

However, if you get similar problems with a GFF3 file converted
from GenBank using BioPerl, then I guess it is a Galaxy issue.


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