Messages by Date
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2012/04/13
Re: [galaxy-user] Help!! Uploading with FTP
Jennifer Jackson
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2012/04/13
[galaxy-user] Help!! Uploading with FTP
杨继文
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2012/04/13
Re: [galaxy-user] Job waiting to RUN
Jennifer Jackson
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2012/04/13
Re: [galaxy-user] Job waiting to RUN
Wang, Michael
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2012/04/13
[galaxy-user] Editing workflows : Server error ?
Sandrine Hughes
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2012/04/13
Re: [galaxy-user] wig to bigwig error
Jennifer Jackson
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2012/04/13
Re: [galaxy-user] Alignment coordinates
Ross
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2012/04/13
Re: [galaxy-user] Alignment coordinates
Jennifer Jackson
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2012/04/13
Re: [galaxy-user] Job waiting to RUN
Jennifer Jackson
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2012/04/13
Re: [galaxy-user] History not accessible
Jennifer Jackson
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2012/04/13
[galaxy-user] wig to bigwig error
Michael Sikes
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2012/04/13
[galaxy-user] History not accessible
Luciano Cosme
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2012/04/13
[galaxy-user] Job waiting to RUN
Ateeq ur Rehman
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2012/04/12
[galaxy-user] Alignment coordinates
Erika Kruse
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2012/04/12
Re: [galaxy-user] find nothing but Workflows
Jeremy Goecks
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2012/04/12
[galaxy-user] find nothing but Workflows
dongdong zhaoweiming
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2012/04/11
Re: [galaxy-user] Workshop in Chicago
Jeremy Goecks
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2012/04/11
Re: [galaxy-user] Megablast question
Jennifer Jackson
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2012/04/11
Re: [galaxy-user] Galaxy logo: licence? (blog article project)
Louise-Amélie Schmitt
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2012/04/11
Re: [galaxy-user] Galaxy logo: licence? (blog article project)
Jennifer Jackson
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2012/04/11
Re: [galaxy-user] Workshop in Chicago
Scott W. Tighe
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2012/04/11
[galaxy-user] Galaxy logo: licence? (blog article project)
Louise-Amélie Schmitt
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2012/04/10
[galaxy-user] equicktandem search not yielding any results
Harry Podschwit
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2012/04/10
[galaxy-user] (no subject)
Michael Sikes
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2012/04/10
[galaxy-user] Megablast question
shamsher jagat
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2012/04/10
[galaxy-user] Toolshed initial upload errors out
Paul-Michael Agapow
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2012/04/09
Re: [galaxy-user] permissions on folder created by Galaxy
Jennifer Jackson
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2012/04/09
Re: [galaxy-user] Tophat paired end read
Carlos Borroto
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2012/04/09
Re: [galaxy-user] Question about megablast
Jennifer Jackson
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2012/04/09
[galaxy-user] GCC2012 Abstract Submission Deadline is April 16, one week from today.
Dave Clements
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2012/04/09
Re: [galaxy-user] Tophat paired end read
Jennifer Jackson
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2012/04/09
[galaxy-user] inconsistency with query results at different time periods
Jennifer Jackson
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2012/04/09
[galaxy-user] Question about megablast
shamsher jagat
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2012/04/09
[galaxy-user] Tophat paired end read
杨继文
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2012/04/06
Re: [galaxy-user] MarkupSafe cannot be fetched
Sarah Maman
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2012/04/06
Re: [galaxy-user] MarkupSafe cannot be fetched
Sarah Maman
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2012/04/06
[galaxy-user] MarkupSafe cannot be fetched
Sarah Maman
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2012/04/06
[galaxy-user] permissions on folder created by Galaxy
Guilhem Sempéré
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2012/04/05
[galaxy-user] CLIP-Seq data
Wang, Michael
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2012/04/04
Re: [galaxy-user] Annotation
Jennifer Jackson
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2012/04/04
Re: [galaxy-user] Multiple sample runs using workflow
Jennifer Jackson
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2012/04/04
Re: [galaxy-user] Galaxy Server running error in fetching sequences
Jennifer Jackson
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2012/04/04
Re: [galaxy-user] Generating gff file
Jennifer Jackson
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2012/04/04
Re: [galaxy-user] BWA in Galaxy
Jennifer Jackson
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2012/04/04
Re: [galaxy-user] Generating gff file
Jennifer Jackson
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2012/04/04
Re: [galaxy-user] Galaxy Server running error in fetching sequences
Jennifer Jackson
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2012/04/04
[galaxy-user] Multiple sample runs using workflow
Praveen Raj Somarajan
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2012/04/03
[galaxy-user] FASTQ joiner fails to join PE data.
meganathan pr
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2012/04/03
Re: [galaxy-user] Galaxy Server running error in fetching sequences
Anton Nekrutenko
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2012/04/03
Re: [galaxy-user] Disk space quota Issue
Jennifer Jackson
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2012/04/03
[galaxy-user] Annotation
hsharm03
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2012/04/03
Re: [galaxy-user] Cloudman - Problem starting shared cluster
Brad Chapman
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2012/04/03
Re: [galaxy-user] input for GATK DepthOfCoverage
Lilach Friedman
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2012/04/03
Re: [galaxy-user] Cloudman - Problem starting shared cluster
mailing list
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2012/04/03
Re: [galaxy-user] Cloudman - Problem starting shared cluster
Brad Chapman
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2012/04/03
[galaxy-user] input for GATK DepthOfCoverage
Lilach Friedman
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2012/04/03
Re: [galaxy-user] Cloudman - Problem starting shared cluster
mailing list
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2012/04/03
Re: [galaxy-user] Blast2GO local instance Re: Table with gene count reads
Greg Von Kuster
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2012/04/03
Re: [galaxy-user] Blast2GO local instance Re: Table with gene count reads
Peter Cock
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2012/04/02
Re: [galaxy-user] Training on NGS data analysis
Dave Clements
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2012/04/02
Re: [galaxy-user] Cloudman - Problem starting shared cluster
Enis Afgan
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2012/04/02
[galaxy-user] BWA in Galaxy
shamsher jagat
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2012/04/02
[galaxy-user] Disk space quota Issue
Ateequr Rehman
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2012/04/02
[galaxy-user] Generating gff file
Abdullah Al Mahmud
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2012/04/02
Re: [galaxy-user] Cloudman - Problem starting shared cluster
Dannon Baker
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2012/04/02
Re: [galaxy-user] Cloudman - Problem starting shared cluster
mailing list
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2012/04/02
[galaxy-user] Google Summer of Code 2012 - Application Deadline on Friday 6th
Robin Haw
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2012/04/02
Re: [galaxy-user] Blast2GO local instance Re: Table with gene count reads
Greg Von Kuster
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2012/04/02
[galaxy-user] April 2012 Galaxy Update
Dave Clements
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2012/04/02
Re: [galaxy-user] USing GATK DepthOfCoverage with all exon enriched data
Lilach Friedman
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2012/04/02
[galaxy-user] USing GATK DepthOfCoverage with all exon enriched data
Lilach Friedman
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2012/04/02
Re: [galaxy-user] embl 66 genome for RNAseq analysis
Jennifer Jackson
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2012/04/02
[galaxy-user] embl 66 genome for RNAseq analysis
Karthik Srinivasan
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2012/04/02
[galaxy-user] Cloudman - Problem starting shared cluster
mailing list
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2012/03/30
Re: [galaxy-user] CummeRband in Galaxy platform
Noa Sher
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2012/03/30
Re: [galaxy-user] CummeRband in Galaxy platform
Carlos Borroto
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2012/03/30
[galaxy-user] CummeRband in Galaxy platform
Bomba Dam
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2012/03/29
Re: [galaxy-user] correct input into the minimum alignment count
Jennifer Jackson
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2012/03/29
Re: [galaxy-user] how to view the Tophat output ?
James Robinson
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2012/03/29
Re: [galaxy-user] how to view the Tophat output ?
Jennifer Jackson
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2012/03/29
[galaxy-user] correct input into the minimum alignment count
vang0280
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2012/03/29
[galaxy-user] how to view the tophat output ?
Xu, Jianpeng
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2012/03/29
[galaxy-user] how to view the Tophat output ?
Xu, Jianpeng
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2012/03/28
[galaxy-user] Training on NGS data analysis
Aarti Desai
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2012/03/28
Re: [galaxy-user] https://biocloudcentral.herokuapp.com/launch site is down
mailing list
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2012/03/28
Re: [galaxy-user] https://biocloudcentral.herokuapp.com/launch site is down
Brad Chapman
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2012/03/28
Re: [galaxy-user] https://biocloudcentral.herokuapp.com/launch site is down
Jennifer Jackson
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2012/03/28
[galaxy-user] https://biocloudcentral.herokuapp.com/launch site is down
mailing list
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2012/03/27
Re: [galaxy-user] Cow Genome update in Tophat
Jennifer Jackson
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2012/03/27
Re: [galaxy-user] Cow Genome update in Tophat
Church, Deanna (NIH/NLM/NCBI) [E]
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2012/03/27
Re: [galaxy-user] Cow Genome update in Tophat
Jennifer Jackson
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2012/03/27
[galaxy-user] Cow Genome update in Tophat
Aranday-Cortes, Elihu
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2012/03/27
[galaxy-user] RV: Subdivide peaks
Mónica Pérez Alegre
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2012/03/26
Re: [galaxy-user] Cleanup script error - guess_dialect_for_url
Jennifer Jackson
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2012/03/26
Re: [galaxy-user] How can I sort BAM/SAM file by read names?
Jennifer Jackson
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2012/03/26
[galaxy-user] How can I sort BAM/SAM file by read names?
Carlos Borroto
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2012/03/26
[galaxy-user] Cleanup script error - guess_dialect_for_url
rocco.piazza
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2012/03/25
Re: [galaxy-user] Chip-seq exercise
Casey Bergman
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2012/03/24
Re: [galaxy-user] Blast2GO local instance Re: Table with gene count reads
Peter Cock
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2012/03/23
[galaxy-user] Blast2GO local instance Re: Table with gene count reads
Luciano Cosme
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2012/03/23
Re: [galaxy-user] Reference genomes at local instance of Galaxy
Jennifer Jackson
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2012/03/23
[galaxy-user] Reference genomes at local instance of Galaxy
Yang, Yanming
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2012/03/23
Re: [galaxy-user] Table with gene count reads
Jennifer Jackson
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2012/03/22
Re: [galaxy-user] problems with color settings in Visualizations
Jeremy Goecks
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2012/03/22
[galaxy-user] problems with color settings in Visualizations
Mackenzie Gavery
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2012/03/22
[galaxy-user] Subdivide peaks
Mónica Pérez Alegre
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2012/03/22
Re: [galaxy-user] "Job is waiting to run"
Nate Coraor
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2012/03/22
Re: [galaxy-user] Chip-seq exercise
Daniel Blankenberg
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2012/03/22
Re: [galaxy-user] "Job is waiting to run"
Mónica Pérez Alegre
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2012/03/21
Re: [galaxy-user] Drosophila yakuba reference genome
Jennifer Jackson
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2012/03/21
[galaxy-user] Chip-seq exercise
Joshua Udall
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2012/03/21
Re: [galaxy-user] Bowtie Seed length (-l) and non-unique reads mode (m=-1)
Jennifer Jackson
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2012/03/21
[galaxy-user] Drosophila yakuba reference genome
Evgeny Brud
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2012/03/21
[galaxy-user] (no subject)
Moein Farshchian
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2012/03/21
[galaxy-user] "Job is waiting to run"
Shisheng Li
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2012/03/21
Re: [galaxy-user] Deploying a tool
Greg Von Kuster
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2012/03/21
[galaxy-user] Deploying a tool
Mark Maienschein-Cline
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2012/03/21
Re: [galaxy-user] How to add alignment to the MAF
Jennifer Jackson
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2012/03/21
Re: [galaxy-user] Bowtie Seed length (-l) and non-unique reads mode (m=-1)
Jennifer Jackson
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2012/03/21
Re: [galaxy-user] Trouble with BLAST+ and .loc file
Makis Ladoukakis
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2012/03/21
Re: [galaxy-user] Trouble with BLAST+ and .loc file
Peter Cock
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2012/03/21
Re: [galaxy-user] Trouble with BLAST+ and .loc file
Björn Grüning
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2012/03/21
Re: [galaxy-user] Trouble with BLAST+ and .loc file
Peter Cock
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2012/03/21
[galaxy-user] Trouble with BLAST+ and .loc file
Makis Ladoukakis
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2012/03/20
Re: [galaxy-user] [galaxy-dev] Tophat error
David Matthews
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2012/03/20
Re: [galaxy-user] Cuffdiff result P and q values
Jennifer Jackson
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2012/03/20
[galaxy-user] GCC2012 Early Registration is Now Open
Dave Clements
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2012/03/20
Re: [galaxy-user] [galaxy-dev] Tophat error
Jennifer Jackson
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2012/03/20
Re: [galaxy-user] ftp
Nate Coraor
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2012/03/20
[galaxy-user] ftp
Richard Mark White
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2012/03/19
[galaxy-user] Table with gene count reads
Luciano Cosme
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2012/03/19
[galaxy-user] Bowtie Seed length (-l) and non-unique reads mode (m=-1)
Eric Guo
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2012/03/19
[galaxy-user] Cuffdiff result P and q values
Ateequr Rehman
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2012/03/19
Re: [galaxy-user] Combining two workflows into one
Innocent Onsongo
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2012/03/19
Re: [galaxy-user] Combining two workflows into one
Peter Cock
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2012/03/19
Re: [galaxy-user] Combining two workflows into one
Peter Cock
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2012/03/19
[galaxy-user] Combining two workflows into one
Innocent Onsongo
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2012/03/19
[galaxy-user] Dear Galaxy Developer, where is the "history/workflow" flow stored in the local machine?
yangchen
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2012/03/19
[galaxy-user] Dear Galaxy Developer, where is the "history/workflow" file stored in the local machine?
杨晨
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2012/03/19
[galaxy-user] Dear Galaxy Developer, where is the "history/workflow" file stored in the local machine?
杨晨
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2012/03/16
Re: [galaxy-user] wig file conversion
Jennifer Jackson
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2012/03/16
Re: [galaxy-user] fastq-MCF
Jennifer Jackson
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2012/03/15
Re: [galaxy-user] Read Length Distribution
Jennifer Jackson
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2012/03/15
Re: [galaxy-user] Read Length Distribution
Jennifer Jackson
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2012/03/15
[galaxy-user] Read Length Distribution
Elad Firnberg
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2012/03/15
[galaxy-user] wig file conversion
Horvath, Lindsay
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2012/03/15
[galaxy-user] Create VCF file from samtools pile-up
Geert Vandeweyer
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2012/03/14
Re: [galaxy-user] Question about aaChange tool.
Jennifer Jackson
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2012/03/14
[galaxy-user] Maq consensus calling changes quality score of the read?
Antony Jose
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2012/03/14
Re: [galaxy-user] Tophat error
David Matthews
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2012/03/14
Re: [galaxy-user] Tophat error
Jennifer Jackson
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2012/03/14
[galaxy-user] Maq consensus calling changes quality score of the read?
Antony Jose
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2012/03/14
[galaxy-user] Tophat error
David Matthews
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2012/03/14
[galaxy-user] Tophat error
David Matthews
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2012/03/14
[galaxy-user] Tophat error
David Matthews
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2012/03/13
Re: [galaxy-user] Question about plotting circos plot
Jennifer Jackson
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2012/03/13
Re: [galaxy-user] Quick question on generated tables
Ross
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2012/03/13
[galaxy-user] Quick question on generated tables
Carly Hom
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2012/03/13
Re: [galaxy-user] Error using intersect tool: "problem: 536870912 is larger than the size of this BitSet (536870912)."
Jennifer Jackson
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2012/03/13
Re: [galaxy-user] Dataset name in dataset file
Jennifer Jackson
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2012/03/13
Re: [galaxy-user] Problem Interset interval tools
Jennifer Jackson
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2012/03/13
Re: [galaxy-user] Extracting number of reads from Bowtie analysis
Jennifer Jackson
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2012/03/13
Re: [galaxy-user] Metagenomics
Montoya, Vincent
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2012/03/13
Re: [galaxy-user] Metagenomics
Jennifer Jackson
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2012/03/13
Re: [galaxy-user] bed to gff
Jennifer Jackson
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2012/03/13
Re: [galaxy-user] Tophat "Mean Inner Distance between Mate Pairs"
Jennifer Jackson
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2012/03/13
[galaxy-user] How to Pass Parameter
Jennifer Jackson
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2012/03/13
[galaxy-user] How to Pass Parameter
La Chi
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2012/03/13
Re: [galaxy-user] Metagenomics
Jennifer Jackson
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2012/03/13
[galaxy-user] March 12, 2012 Galaxy Development News Brief
Jennifer Jackson
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2012/03/12
[galaxy-user] March 12, 2012 Galaxy Development News Brief
Jennifer Jackson
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2012/03/12
Re: [galaxy-user] [galaxy-dev] Welcome.html page
Huayan Gao
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2012/03/12
[galaxy-user] March 12, 2012 Galaxy Development News Brief
Jennifer Jackson
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2012/03/12
Re: [galaxy-user] Advice on disabling SGE queue on galaxy-cloudman
Enis Afgan
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2012/03/12
Re: [galaxy-user] Metagenomics
Scott Tighe
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2012/03/12
Re: [galaxy-user] Metagenomics
Peter Cock
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2012/03/12
Re: [galaxy-user] Metagenomics
John Major
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2012/03/12
[galaxy-user] Extracting number of reads from Bowtie analysis
Jerzy Dyczkowski
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2012/03/12
Re: [galaxy-user] Problems starting Galaxy Cloudman
Enis Afgan
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2012/03/12
Re: [galaxy-user] [galaxy-dev] Welcome.html page
Ross
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2012/03/12
Re: [galaxy-user] [galaxy-dev] Welcome.html page
Greg Edwards
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2012/03/11
Re: [galaxy-user] Problems starting Galaxy Cloudman
Greg Edwards
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2012/03/10
Re: [galaxy-user] Incorrect permissions when uploading files
Greg Von Kuster
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2012/03/10
[galaxy-user] Incorrect permissions when uploading files
James Vincent
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2012/03/09
Re: [galaxy-user] Tophat
Jennifer Jackson
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2012/03/09
Re: [galaxy-user] Job running speed is really slow
Jennifer Jackson
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2012/03/09
Re: [galaxy-user] Question about aaChange tool.
Jennifer Jackson
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2012/03/09
Re: [galaxy-user] Clustal error during Bowtie run (public server)
Jennifer Jackson
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2012/03/09
Re: [galaxy-user] Problems starting Galaxy Cloudman
Ross
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2012/03/09
Re: [galaxy-user] Problems starting Galaxy Cloudman
Greg Edwards
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2012/03/09
[galaxy-user] Question about aaChange tool.
Maha Al Kahtani
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2012/03/09
[galaxy-user] Clustal error during Bowtie run (public server)
Hemarajata, Peera
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2012/03/09
Re: [galaxy-user] question from a new Galaxy user
Kevin L
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2012/03/09
Re: [galaxy-user] Problems starting Galaxy Cloudman
Dannon Baker
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2012/03/08
[galaxy-user] Problems starting Galaxy Cloudman
Greg Edwards
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2012/03/08
Re: [galaxy-user] Speed up uploading into local Galaxy, terribly slow!!
Alejandra Rougon
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2012/03/08
[galaxy-user] Problem Interset interval tools
Mónica Pérez Alegre
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2012/03/07
Re: [galaxy-user] FastQC in main galaxy server?
Jennifer Jackson
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2012/03/07
Re: [galaxy-user] Metagenomics
Jennifer Jackson
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2012/03/07
Re: [galaxy-user] description of "Find diagnostic hits"
William Hsiao