Hello All,

One more problem when running analysis on local galaxy install. I am trying to 
run fastqc on a fastq file I just imported. I have fastqc in 
~/Programs/Galaxy/galaxy-dist/tool-data/shared/jars/FastQC



I am getting the following error

## odpath=None: No output found in None. Output for the run was:



/bin/sh: /root/Programs/Galaxy/galaxy-dist/tool-data/shared/jars/FastQC/fastqc: 
Permission denied



My guess is the output directory path is not set. If my guess is correct, the 
question is where do I set the path?

If my guess is wrong, any help interpreting the error greatly appreciated.



Aarti


Aarti Desai, Ph.D | Domain Specialist - Life Sciences
aarti_de...@persistent.co.in<mailto:aarti_de...@persistent.co.in> | Cell: 
+91-9673009492 | Tel: + 91-20-67036348
Persistent Systems Ltd. | Partners in Innovation | 
www.persistentsys.com<http://www.persistentsys.com/>


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